{"description": "Genome index for Bisulfite-Seq applications, produced by bismark_genome_preparation using bowtie2", "required_files": [], "required_assets": [{"key": "fasta", "default": "fasta", "description": "fasta asset for genome"}], "required_parameters": [], "container": "databio/refgenie", "assets": {"bismark_bt2_index": "."}, "command_list": ["ln -sf {fasta} {asset_outfolder}", "bismark_genome_preparation --bowtie2 {asset_outfolder}"]}