{"description": "Enhanced suffix array index for genomes using gt (GenomeTools) suffixerator program", "required_parameters": [{"key": "memlimit", "default": "8GB", "description": "The maximum amount of memory available to be used during index construction."}], "required_files": [], "required_assets": [{"key": "fasta", "default": "fasta", "description": "fasta asset for genome"}], "container": "databio/refgenie", "assets": {"esa": "{genome}.sft"}, "command_list": ["gt suffixerator -dna -pl -tis -suf -lcp -v -showprogress -memlimit {memlimit} -db {fasta} -indexname {asset_outfolder}/{genome}.sft"]}